Add NEB schemas (#1123)

Add Approx/NEB schemas and update MigrationGraphDoc for compatibility with atomate2

Author: esoteric-ephemera

.pre-commit-config.yaml

@@ -4,7 +4,7 @@ default_install_hook_types: [pre-commit, commit-msg]
 
 repos:
   - repo: https://github.com/charliermarsh/ruff-pre-commit
-    rev: v0.0.261
+    rev: v0.12.0
     hooks:
       - id: ruff
         args:
@@ -22,7 +22,7 @@ repos:
       - id: black-jupyter
 
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.4.0
+    rev: v5.0.0
     hooks:
       - id: check-case-conflict
       - id: check-symlinks

emmet-builders/tests/test_mobility.py

@@ -7,7 +7,7 @@
 @pytest.fixture(scope="session")
 def ie_store(test_dir):
     return JSONStore(
-        test_dir / "mobility/builder_migration_graph_set.json", key="battery_id"
+        test_dir / "mobility/builder_migration_graph_set.json.gz", key="battery_id"
     )
 
 

emmet-builders/tests/test_utils.py

@@ -33,8 +33,10 @@ def test_chemsys_permutations(test_dir):
 
 
 def test_get_hop_cutoff(test_dir):
-    spinel_mg = loadfn(test_dir / "mobility/migration_graph_spinel_MgMn2O4.json")
-    nasicon_mg = loadfn(test_dir / "mobility/migration_graph_nasicon_MgV2(PO4)3.json")
+    spinel_mg = loadfn(test_dir / "mobility/migration_graph_spinel_MgMn2O4.json.gz")
+    nasicon_mg = loadfn(
+        test_dir / "mobility/migration_graph_nasicon_MgV2(PO4)3.json.gz"
+    )
 
     # tests for "min_distance" algorithm
     assert_almost_equal(