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Merge version number bump and NEWS file from master
Windows/MinGW-W64 CI #104: Commit 38e0139 pushed by daviesrob
May 30, 2025 10:16 7m 42s develop
May 30, 2025 10:16 7m 42s
Release 1.22
Windows/MinGW-W64 CI #103: Commit 0949c4d pushed by daviesrob
May 30, 2025 10:16 7m 46s 1.22
May 30, 2025 10:16 7m 46s
Work around Microsoft's UCRT-x64 pathname rewriting.
Windows/MinGW-W64 CI #102: Commit bf5fc6e pushed by pd3
May 29, 2025 08:35 7m 45s develop
May 29, 2025 08:35 7m 45s
Add apply_verbosity() function to implement --verbosity
Windows/MinGW-W64 CI #101: Commit e77ffb7 pushed by pd3
May 29, 2025 08:22 7m 56s develop
May 29, 2025 08:22 7m 56s
Fix a bug for incorrectly formatted gVCF files
Windows/MinGW-W64 CI #98: Commit 283023b pushed by pd3
May 28, 2025 09:31 7m 43s develop
May 28, 2025 09:31 7m 43s
Work around Microsoft's UCRT-x64 pathname rewriting.
Windows/MinGW-W64 CI #97: Pull request #2412 opened by jkbonfield
May 27, 2025 10:32 7m 39s jkbonfield:UCRT-x64
May 27, 2025 10:32 7m 39s
Copyright year update and build cleanup
Windows/MinGW-W64 CI #96: Commit 3ead9bf pushed by jkbonfield
May 27, 2025 08:33 7m 46s develop
May 27, 2025 08:33 7m 46s
Copyright year update and build cleanup
Windows/MinGW-W64 CI #95: Pull request #2409 opened by vasudeva8
May 23, 2025 16:53 7m 44s vasudeva8:bcf1
May 23, 2025 16:53 7m 44s
Include <strings.h> for strncasecmp() declaration [minor]
Windows/MinGW-W64 CI #94: Commit 21b17b5 pushed by pd3
May 22, 2025 13:03 7m 49s develop
May 22, 2025 13:03 7m 49s
The -s, --samples option was not working properly
Windows/MinGW-W64 CI #92: Commit 70ca3eb pushed by pd3
May 22, 2025 09:08 7m 53s develop
May 22, 2025 09:08 7m 53s
Use the highest VCF version when merging headers
Windows/MinGW-W64 CI #91: Commit 05621cf pushed by jkbonfield
May 19, 2025 11:34 7m 40s develop
May 19, 2025 11:34 7m 40s
Use the highest VCF version when merging headers
Windows/MinGW-W64 CI #90: Pull request #2404 synchronize by jkbonfield
May 19, 2025 11:25 8m 4s bt-2395-hdr-version
May 19, 2025 11:25 8m 4s
Use the highest VCF version when merging headers
Windows/MinGW-W64 CI #89: Commit 24f3f32 pushed by jkbonfield
May 19, 2025 11:25 7m 32s bt-2395-hdr-version
May 19, 2025 11:25 7m 32s
test update with updated rlen calculation in htslib
Windows/MinGW-W64 CI #88: Commit 34c3edd pushed by pd3
May 16, 2025 09:10 7m 47s develop
May 16, 2025 09:10 7m 47s
Make --hts-verbose work, incorrect optkey was used
Windows/MinGW-W64 CI #87: Commit 65cbaea pushed by pd3
May 12, 2025 13:25 7m 43s develop
May 12, 2025 13:25 7m 43s
Use the highest VCF version when merging headers
Windows/MinGW-W64 CI #86: Pull request #2404 opened by pd3
May 8, 2025 15:43 7m 53s bt-2395-hdr-version
May 8, 2025 15:43 7m 53s
Use the highest VCF version when merging headers
Windows/MinGW-W64 CI #85: Commit 3f620f6 pushed by pd3
May 8, 2025 15:42 7m 50s bt-2395-hdr-version
May 8, 2025 15:42 7m 50s
test update with updated rlen calculation in htslib
Windows/MinGW-W64 CI #84: Pull request #2402 opened by vasudeva8
May 7, 2025 16:42 7m 57s vasudeva8:rlen_test
May 7, 2025 16:42 7m 57s
Add experimental, and for now hidden, option --hts-verbose
Windows/MinGW-W64 CI #83: Commit 9f4bef6 pushed by pd3
May 7, 2025 14:17 7m 58s develop
May 7, 2025 14:17 7m 58s
Fix a bug, the -S, --samples-file option is no longer ignored
Windows/MinGW-W64 CI #82: Commit f85deee pushed by pd3
May 5, 2025 13:49 7m 52s develop
May 5, 2025 13:49 7m 52s
Add tests for mpileup non-ACGT characters, see #2393
Windows/MinGW-W64 CI #81: Commit 0bce7ab pushed by pd3
May 1, 2025 05:57 7m 41s develop
May 1, 2025 05:57 7m 41s
New option to remove or annotate clusters of sites within a window
Windows/MinGW-W64 CI #80: Commit 1719c60 pushed by pd3
April 30, 2025 12:47 8m 6s develop
April 30, 2025 12:47 8m 6s