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Choose subset of samples from reference files for --run_ancestry

enhancementNew feature or requestNew feature or request

Status: Open.

#439 In PGScatalog/pgsc_calc;

· zx8754 opened on Jul 4, 2025

Process requirement exceeds available memory -- req: 24 GB; avail: 16 GB

Status: Open.

#438 In PGScatalog/pgsc_calc;

· traycho opened on Jun 26, 2025

Setting multiple scores in one custom scoring file

bugSomething isn't workingSomething isn't working

Status: Open.

#437 In PGScatalog/pgsc_calc;

· Sabramow opened on Jun 24, 2025

running pgsc_calc with >1 file per chromosome

enhancementNew feature or requestNew feature or request

Status: Open.

#426 In PGScatalog/pgsc_calc;

· Sabramow opened on May 15, 2025

Supported file formats: vcf.gz

bugSomething isn't workingSomething isn't working

enhancementNew feature or requestNew feature or request

Status: Open.

#425 In PGScatalog/pgsc_calc;

· candicecjj opened on May 14, 2025

Name of columns in output file

enhancementNew feature or requestNew feature or request

user-queryUser queries & requestsUser queries & requests

Status: Open.

#424 In PGScatalog/pgsc_calc;

· scienception opened on May 12, 2025

Error with matching genotype files?

user-queryUser queries & requestsUser queries & requests

Status: Open.

#423 In PGScatalog/pgsc_calc;

· scienception opened on May 12, 2025

APPLY_SCORE Failing on Google Cloud Batch

bugSomething isn't workingSomething isn't working

user-queryUser queries & requestsUser queries & requests

Status: Open.

#422 In PGScatalog/pgsc_calc;

· alex1craig opened on May 5, 2025

Pipeline Crashes due to Low Overlap but Scoring File Markers Are Present

user-queryUser queries & requestsUser queries & requests

Status: Open.

#418 In PGScatalog/pgsc_calc;

· Lord-of-Bugs opened on Apr 25, 2025

--run_ancestry fails on Imputed arrays in UKB-RAP

bugSomething isn't workingSomething isn't working

documentationImprovements or additions to documentationImprovements or additions to documentation

user-queryUser queries & requestsUser queries & requests

Status: Open.

#410 In PGScatalog/pgsc_calc;

· ashenfernando1 opened on Mar 20, 2025

Better support for WGS data

enhancementNew feature or requestNew feature or request

Status: Open.

#396 In PGScatalog/pgsc_calc;

· smlmbrt opened on Dec 9, 2024

bfile works but pfile errors out

bugSomething isn't workingSomething isn't working

user-queryUser queries & requestsUser queries & requests

Status: Open.

#394 In PGScatalog/pgsc_calc;

· batzler opened on Dec 4, 2024

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v2.1.0