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dbverse

Object-relational mappings for scientific analytics.

dbverse is an open-source ecosystem for working with larger-than-memory scientific data with analytical databases.

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Core libraries

Project directories, connection lifecycle, pinned resources, and database-backed data objects.

R source · R reference

Sparse and dense matrix operations that keep large arrays in an analytical database.

R source · R reference

Spatial geometry data loading, geometry operations, measurements, and joins.

R source · R reference

Genomic data ingestion, lazy ranges, overlap filtering, and coverage over database-backed data.

R source ·

dbVisuals

Visualization workspace for database-backed data.

Incubating

Language availability

The documentation is organized around scientific capabilities, with matching language examples as each implementation becomes available.

Language Status Package index
R Available R-universe and the package references above
Python Incubating -
Julia Incubating -

Built with dbverse

R package that extends the Giotto spatial framework for database-backed spatial omics data analysis.

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