Short Linear Motif (SLiM) Analysis in the context of human diseases
R script to 1) Extract missense variants that had been observed in "clinical testing" (as opposed to "literature only") in ClinVar. 2) Calculating movability and reappearance parameters using the aggregated and capped Invitae variant counts. 3) Apply the movability and reappearance parameters to ClinVar genes, calculating their movability- and r…
This folder contains R scripts for differential expression analysis and analyses of tissue-specific expression, inter-species conservation, and genetic variations of the CAPN10 gene in a bioinformatics project on PCOS and insulin resistance.
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