Koma is a Pulseq-compatible framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse sequence development.

MIRT: Michigan Image Reconstruction Toolbox (Julia version)

Julia module for reading/writing NIfTI MRI files

An implementation of the Bloch-McConnell equations for simulating MR spin dynamics.

Specialized tools for MRI

Diffusion MRI Simulation Toolbox in Julia

An Open-Source End-to-End Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia

Handling of structural neuroimaging file formats for Julia.

SPM in Julia

This is demo code for the paper “Hybrid MRI-ultrasound acquisitions, and scannerless real-time imaging”.

Code for reproducing results in "Myelin Water Fraction Estimation Using Small-Tip Fast Recovery MRI".

3D T2 mapping based on accelerated MESE with a subspace constrained reconstruction

Koma is a Pulseq-compatible framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse sequence development.

Abdominal QSM Phantom is a Julia toolbox for simulating and analyzing abdominal QSM. The toolbox enables creation of synthetic susceptibility maps, R2* maps, fieldmaps, and simulation of complex water-fat signal acquisitions. It is ideal for validating water-fat separation, background field removal, and QSM methods.

Optimal control in Medical Resonance Imaging by Nuclear Magnetic Resonance

Julia Package for MRI Reconstruction

getting started with data analysis with #julialang and sample MRI data

This repository provides code and tools for data stitching in dynamic field monitoring using NMR probes. It is a Julia toolbox for MR simulation and reconstruction that can incorporate dynamic field changes associated with the gradients throughout the sequence.

Julia implementation of the ISMRM RRSG challenge