1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates
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Jan 28, 2025 - C
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ot2od032119
Here are 15 public repositories matching this topic...
Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.
docker aws bioinformatics snakemake aws-lambda pipelines conda wdl cwl aws-step-function wdl-workflow cwl-workflow snakemake-workflow u01ca200059 ot2od032119
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Aug 19, 2025 - Python
Docker for 4DN Hi-C processing pipeline
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Nov 26, 2024 - Common Workflow Language
Data portal for submitting and viewing genomic data
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Aug 22, 2025 - JavaScript
React component for visualizing CWL-like workflows (and similar data)
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Oct 30, 2024 - JavaScript
Providing insight into your application using AWS infrastructure.
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Aug 20, 2025 - Python
various util modules shared amongst several projects in our organization
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Aug 12, 2025 - Python
Developing tools for data submission, curation and control
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Feb 25, 2025 - Python
This is an extension of Tibanna that integrates with 4DN/CGAP/SMaHT data portals.
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May 20, 2025 - Python
Common components for use by 4DN and CGAP portal(s)
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Aug 20, 2025 - JavaScript
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Aug 20, 2025 - Python
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Apr 28, 2025
The SnoVault general purpose hybrid object-relational database
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Aug 5, 2025 - Python
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Apr 17, 2025 - Python
Cloud Formation templates for 4dn-dcic AWS environments
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Jun 30, 2025 - Python
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